Publications from 2008 to now
Showing entries 1 - 20 out of 347
2024
Strniša, F, Tinta, T, Herndl, GJ & Kosec, G 2024, 'Dynamic population modeling of bacterioplankton community response to gelatinous marine zooplankton bloom collapse and its impact on marine nutrient balance', Progress in Oceanography, vol. 227, 103312. https://doi.org/10.1016/j.pocean.2024.103312
Heneghan, RF, Holloway-Brown, J, Gasol, JM, Herndl, GJ, Morán, XAG & Galbraith, ED 2024, 'The global distribution and climate resilience of marine heterotrophic prokaryotes', Nature Communications, vol. 15, 6943, pp. 1-11. https://doi.org/10.1038/s41467-024-50635-z
Zhao, Z, Amano, C, Reinthaler, T, Baltar, F, Orellana, MV & Herndl, GJ 2024, 'Metaproteomic analysis decodes trophic interactions of microorganisms in the dark ocean', Nature Communications, vol. 15, no. 1, 6411, pp. 6411. https://doi.org/10.1038/s41467-024-50867-z
Jiao, N, Luo, T, Chen, Q, Zhao, Z, Xiao, X, Liu, J, Jian, Z, Xie, S, Thomas, H, Herndl, GJ, Benner, R, Gonsior, M, Chen, F, Cai, W-J & Robinson, C 2024, 'The microbial carbon pump and climate change', Nature Reviews. Microbiology, vol. 22, no. 7, pp. 408-419. https://doi.org/10.1038/s41579-024-01018-0
Chen, S, Xie, Z-X, Yan, K-Q, Chen, J-W, Li, D-X, Wu, P-F, Peng, L, Lin, L, Dong, C-M, Zhao, Z, Fan, G-Y, Liu, S-Q, Herndl, GJ & Wang, D-Z 2024, 'Functional vertical connectivity of microbial communities in the ocean', Science Advances, vol. 10, no. 21, adj8184. https://doi.org/10.1126/sciadv.adj8184
Zhao, Z, Baltar, F & Herndl, GJ 2024, 'Decoupling between the genetic potential and the metabolic regulation and expression in microbial organic matter cleavage across microbiomes', Microbiology Spectrum, vol. 12, no. 5, pp. e0303623. https://doi.org/10.1128/spectrum.03036-23
Zhao, Z, Amano, C, Reinthaler, T, Orellana, MV & Herndl, GJ 2024, 'Substrate uptake patterns shape niche separation in marine prokaryotic microbiome', Science Advances, vol. 10, no. 20, eadn5143. https://doi.org/10.1126/sciadv.adn5143
Fadeev, E, Hennenfeind, JH, Amano, C, Zhao, Z, Klun, K, Herndl, GJ & Tinta, T 2024, 'Bacterial degradation of ctenophore Mnemiopsis leidyi organic matter', mSystems, vol. 9, no. 2, e01264-23. https://doi.org/10.1128/msystems.01264-23
Salazar-Alekseyeva, K, Herndl, GJ & Baltar, F 2024, 'Influence of Salinity on the Extracellular Enzymatic Activities of Marine Pelagic Fungi', Journal of Fungi, vol. 10, no. 2, 152. https://doi.org/10.3390/jof10020152
Orel, N, Fadeev, E, Herndl, GJ, Turk, V & Tinta, T 2024, 'Recovering high-quality bacterial genomes from cross-contaminated cultures: a case study of marine Vibrio campbellii', BMC Genomics, vol. 25, no. 1, 146. https://doi.org/10.1186/s12864-024-10062-2
Masdeu-Navarro, M, Mangot, JF, Xue, L, Cabrera-Brufau, M, Kieber, DJ, Rodríguez-Ros, P, Gardner, SG, Bergauer, K, Herndl, GJ, Marrasé, C & Simó, R 2024, 'Diel variation of seawater volatile organic compounds, DMSP-related compounds, and microbial plankton inside and outside a tropical coral reef ecosystem', Frontiers in Marine Science , vol. 11, 1341619. https://doi.org/10.3389/fmars.2024.1341619
2023
Tang, W, Ward, BB, Beman, M, Bristow, L, Clark, D, Fawcett, S, Frey, C, Fripiat, F, Herndl, GJ, Mdutyana, M, Paulot, F, Peng, X, Santoro, AE, Shiozaki, T, Sintes, E, Stock, C, Sun, X, Wan, XS, Xu, MN & Zhang, Y 2023, 'Database of nitrification and nitrifiers in the global ocean', Earth System Science Data, vol. 15, no. 11, pp. 5036-5077. https://doi.org/10.5194/essd-15-5039-2023
Srivastava, A, De Corte, D, Garcia, JAL, Swan, BK, Stepanauskas, R, Herndl, GJ & Sintes, E 2023, 'Interplay between autotrophic and heterotrophic prokaryotic metabolism in the bathypelagic realm revealed by metatranscriptomic analyses', Microbiome, vol. 11, no. 1, 239. https://doi.org/10.1186/s40168-023-01688-7
Burian, A, Gruber-Dorninger, M, Schweichart, J, Yasindi, A, Bulling, M, Jirsa, F, Winter, C, Muia, AW & Schagerl, M 2023, 'Drivers of microbial food-web structure along productivity gradients', Proceedings of the Royal Society B: Biological Sciences, vol. 290, no. 2009, 20231531, pp. 20231531. https://doi.org/10.1098/rspb.2023.1531
Debeljak, P, Bayer, B, Sun, Y, Herndl, GJ & Obernosterer, I 2023, 'Seasonal patterns in microbial carbon and iron transporter expression in the Southern Ocean', Microbiome, vol. 11, no. 1, 187. https://doi.org/10.1186/s40168-023-01600-3
Tinta, T, Zhao, Z, Bayer, B & Herndl, GJ 2023, 'Jellyfish detritus supports niche partitioning and metabolic interactions among pelagic marine bacteria', Microbiome, vol. 11, no. 1, 156, pp. 156. https://doi.org/10.1186/s40168-023-01598-8
Baltar, F, Martínez-Pérez, C, Amano, C, Vial, M, Robaina-Estévez, S, Reinthaler, T, Herndl, GJ, Zhao, Z, Logares, R, Morales, SE & González, JM 2023, 'A ubiquitous gammaproteobacterial clade dominates expression of sulfur oxidation genes across the mesopelagic ocean', Nature Microbiology, vol. 8, no. 6, pp. 1137-1148. https://doi.org/10.1038/s41564-023-01374-2
Heitger, M & Baltar, F 2023, 'Respiration, Production, and Growth Efficiency of Marine Pelagic Fungal Isolates', Journal of Fungi, vol. 9, no. 4, 417. https://doi.org/10.3390/jof9040417
Herndl, GJ, Bayer, B, Baltar, F & Reinthaler, T 2023, 'Prokaryotic Life in the Deep Ocean's Water Column', Annual review of marine science, vol. 15, 1, pp. 461-483. https://doi.org/10.1146/annurev-marine-032122-115655
Fadeev, E, Carpaneto Bastos, C, Hennenfeind, JH, Biller, SJ, Sher, D, Wietz, M & Herndl, GJ 2023, 'Characterization of membrane vesicles in
Alteromonas macleodii indicates potential roles in their copiotrophic lifestyle.', Microlife, vol. 4, uqac025. https://doi.org/10.1093/femsml/uqac025