Publications from 2008 to now
2020
Nelson, KS, Baltar, F, Lamare, MD & Morales, SE 2020, 'Ocean acidification affects microbial community and invertebrate settlement on biofilms', Scientific Reports, vol. 10, no. 1, pp. 3274. doi.org/10.1038/s41598-020-60023-4
Zhang, Y, Qin, W, Hou, L, Zakem, EJ, Wan, X, Zhao, Z, Liu, L, Hunt, KA, Jiao, N, Kao, S-J, Tang, K, Xie, X, Shen, J, Li, Y, Chen, M, Dai, X, Liu, C, Deng, W, Dai, M, Ingalls, AE, Stahl, DA & Herndl, GJ 2020, 'Nitrifier adaptation to low energy flux controls inventory of reduced nitrogen in the dark ocean', Proceedings of the National Academy of Sciences of the United States of America. doi.org/10.1073/pnas.1912367117
Reyes, C, Hodgskiss, L, Baars, O, Kerou, M, Bayer, B, Schleper, C & Krämer, S 2020, 'Copper limiting threshold in the terrestrial ammonia oxidizing archaeon Nitrososphaera viennensis', Research in Microbiology. doi.org/10.1016/j.resmic.2020.01.003
Bellou, N, Garcia, JAL, Colijn, F & Herndl, GJ 2020, 'Seasonality combined with the orientation of surfaces influences the microbial community structure of biofilms in the deep Mediterranean Sea', Deep-Sea Research Part II: Topical Studies in Oceanography, vol. 171, 104703. doi.org/10.1016/j.dsr2.2019.104703
Chen, ML, Becraft, ED, Pachiadaki, M, Brown, JM, Jarett, JK, Gasol, JM, Ravin, NV, Moser, DP, Nunoura, T, Herndl, GJ, Woyke, T & Stepanauskas, R 2020, 'Hiding in Plain Sight: The Globally Distributed Bacterial Candidate Phylum PAUC34f', Frontiers in Microbiology, vol. 11, pp. 376. doi.org/10.3389/fmicb.2020.00376
2019
Bochdansky, AB, Dunbar, RB, Hansell, DA & Herndl, GJ 2019, 'Estimating Carbon Flux From Optically Recording Total Particle Volume at Depths Below the Primary Pycnocline', Frontiers in Marine Science, vol. 6, 778. doi.org/10.3389/fmars.2019.00778
Bayer, B, Hansman, RL, Bittner, MJ, Noriega-Ortega, BE, Niggemann, J, Dittmar, T & Herndl, GJ 2019, 'Ammonia-oxidizing archaea release a suite of organic compounds potentially fueling prokaryotic heterotrophy in the ocean', Environmental Microbiology, vol. 21, no. 11, pp. 4062-4075. doi.org/10.1111/1462-2920.14755
Tobias-Hünefeldt, SP, Wing, SR, Espinel-Velasco, N, Baltar, F & Morales, SE 2019, 'Depth and location influence prokaryotic and eukaryotic microbial community structure in New Zealand fjords', Science of the Total Environment, vol. 693, 133507. doi.org/10.1016/j.scitotenv.2019.07.313
Baltar, F, Bayer, B, Bednarsek, N, Deppeler, S, Escribano, R, Gonzalez, CE, Hansman, RL, Mishra, RK, Moran, MA, Repeta, DJ, Robinson, C, Sintes, E, Tamburini, C, Valentin, LE & Herndl, GJ 2019, 'Towards Integrating Evolution, Metabolism, and Climate Change Studies of Marine Ecosystems', Trends in Ecology and Evolution, vol. 34, no. 11, pp. 1022-1033. doi.org/10.1016/j.tree.2019.07.003
Crawshaw, J, O'Meara, T, Savage, C, Thomson, B, Baltar, F & Thrush, SF 2019, 'Source of organic detritus and bivalve biomass influences nitrogen cycling and extracellular enzyme activity in estuary sediments', Biogeochemistry: an international journal. doi.org/10.1007/s10533-019-00608-y
Baltar, F & Herndl, GJ 2019, 'Ideas and perspectives: Is dark carbon fixation relevant for oceanic primary production estimates?', Biogeosciences, vol. 16, no. 19, pp. 3793-3799. doi.org/10.5194/bg-16-3793-2019
Steiner, PA, Mena, C, De Corte, D, Geijo, J, Yokokawa, T, Rattei, T, Herndl, GJ & Sintes, E 2019, 'Highly variable mRNA half-life time within marine bacterial taxa and functional genes', Environmental Microbiology, vol. 21, no. 10, pp. 3873-3884. doi.org/10.1111/1462-2920.14737
Steiner, PA, Sintes, E, Simó, R, De Corte, D, Pfannkuchen, DM, Ivančić, I, Najdek, M & Herndl, GJ 2019, 'Seasonal dynamics of marine snow-associated and free-living demethylating bacterial communities in the coastal northern Adriatic Sea', Environmental Microbiology Reports, vol. 11, no. 5, pp. 699-707. doi.org/10.1111/1758-2229.12783
De Corte, D, Martinez, JM, Cretoiu, MS, Takaki, Y, Nunoura, T, Sintes, E, Herndl, GJ & Yokokawa, T 2019, 'Viral Communities in the Global Deep Ocean Conveyor Belt Assessed by Targeted Viromics', Frontiers in Microbiology, vol. 10, 1801. doi.org/10.3389/fmicb.2019.01801
Thomson, B, Wenley, J, Currie, K, Hepburn, C, Herndl, GJ & Baltar, F 2019, 'Resolving the paradox: Continuous cell-free alkaline phosphatase activity despite high phosphate concentrations', Marine Chemistry, vol. 214, 103671. doi.org/10.1016/j.marchem.2019.103671
Clifford, EL, Varela, MM, De Corte, D, Bode, A, Ortiz, V, Herndl, GJ & Sintes, E 2019, 'Taurine Is a Major Carbon and Energy Source for Marine Prokaryotes in the North Atlantic Ocean off the Iberian Peninsula', Microbial Ecology, vol. 78, no. 2, pp. 299–312. doi.org/10.1007/s00248-019-01320-y
De Corte, D, Paredes, G, Yokokawa, T, Sintes, E & Herndl, GJ 2019, 'Differential Response of Cafeteria roenbergensis to Different Bacterial and Archaeal Prey Characteristics', Microbial Ecology: an international journal, vol. 78, no. 1, pp. 1-5. doi.org/10.1007/s00248-018-1293-y
Bayer, B, Vojvoda, J, Reinthaler, T, Reyes, C, Pinto, M & Herndl, GJ 2019, 'Nitrosopumilus adriaticus sp. nov. and Nitrosopumilus piranensis sp. nov., two ammonia-oxidizing archaea from the Adriatic Sea and members of the class Nitrososphaeria', International Journal of Systematic and Evolutionary Microbiology, vol. 69, no. 7, pp. 1892-1902. doi.org/10.1099/ijsem.0.003360
Bayer, B, Pelikan, C, Bittner, MJ, Reinthaler, T, Könneke, M, Herndl, GJ & Offre, P 2019, 'Proteomic Response of Three Marine Ammonia-Oxidizing Archaea to Hydrogen Peroxide and Their Metabolic Interactions with a Heterotrophic Alphaproteobacterium', mSystems, vol. 4, no. 4. doi.org/10.1128/mSystems.00181-19