Publications from 2008 to now
2018
Biller, SJ, Berube, PM, Dooley, K, Williams, M, Satinsky, BM, Hackl, T, Hogle, SL, Coe, A, Bergauer, K, Bouman, HA, Browning, TJ, De Corte, D, Hassler, C, Hulston, D, Jacquot, JE, Maas, EW, Reinthaler, T, Sintes, E, Yokokawa, T & Chisholm, SW 2018, 'Marine microbial metagenomes sampled across space and time' Scientific Data, vol 5, 180176. DOI: 10.1038/sdata.2018.176
Berube, PM, Biller, SJ, Hackl, T, Hogle, SL, Satinsky, BM, Becker, JW, Braakman, R, Collins, SB, Kelly, L, Berta-Thompson, J, Coe, A, Bergauer, K, Bouman, HA, Browning, TJ, De Corte, D, Hassler, C, Hulata, Y, Jacquot, JE, Maas, EW, Reinthaler, T, Sintes, E, Yokokawa, T, Lindell, D, Stepanauskas, R & Chisholm, SW 2018, 'Singe cell genomes of Prochlorococcus, Synechococcus, and sympatric microbes from diverse marine environments' Scientific Data, vol 5, 180154. DOI: 10.1038/sdata.2018.154
Reyes, C, Hodgskiss, L, Kerou, M, Pribasnig, T, Bayer, B, Schleper, C & Krämer, S 2018, 'How the Ammonia Oxidizing Archaeon Nitrososphaera Viennensis Responds to Copper Limitation' Goldschmidt Conference 2018 , Boston, United States, 12/08/18 - 17/08/18, .
Romera-Castillo, C, Pinto, M, Langer, TM, Alvarez-Salgado, XA & Herndl, GJ 2018, 'Dissolved organic carbon leaching from plastics stimulates microbial activity in the ocean' Nature Communications, vol 9, 1430. DOI: 10.1038/s41467-018-03798-5
Reyes, C, Schleper, C, Bayer, B & Krämer, S 2018, 'The Effect of Copper Limitation on the archaeon Nitrososphaera viennensis' European Geosciences Union (EGU) General Assembly 2018, Vienna, Austria, 8/04/18 - 13/04/18, .
Guerrero-Feijoo, E, Sintes, E, Herndl, GJ & Varela, MM 2018, 'High dark inorganic carbon fixation rates by specific microbial groups in the Atlantic off the Galician coast (NW Iberian margin)' Environmental Microbiology, vol 20, no. 2, pp. 602-611. DOI: 10.1111/1462-2920.13984
De Corte, D, Srivastava, A, Koski, M, Garcia, JAL, Takaki, Y, Yokokawa, T, Nunoura, T, Elisabeth, NH, Sintes, E & Herndl, GJ 2018, 'Metagenomic insights into zooplankton-associated bacterial communities' Environmental Microbiology, vol 20, no. 2, pp. 492-505. DOI: 10.1111/1462-2920.13944
Bergauer, K, Fernandez-Guerra, A, Garcia, JAL, Sprenger, RR, Stepanauskas, R, Pachiadaki, MG, Jensen, ON & Herndl, GJ 2018, 'Organic matter processing by microbial communities throughout the Atlantic water column as revealed by metaproteomics' Proceedings of the National Academy of Sciences of the United States of America (PNAS), vol 115, no. 3, pp. E400-E408. DOI: 10.1073/pnas.1708779115
Winter, C, Köstner, N, Kruspe, C-P, Urban, D, Muck, S, Reinthaler, T & Herndl, GJ 2018, 'Mixing alters the lytic activity of viruses in the dark ocean' Ecology, vol 99, no. 3, pp. 700-713. DOI: 10.1002/ecy.2135
Ivancic, I, Paliaga, P, Pfannkuchen, M, Djakovac, T, Najdek, M, Steiner, P, Korlevic, M, Markovski, M, Baricevic, A, Tankovic, MS & Herndl, GJ 2018, 'Seasonal variation of extracellular enzymatic activity in marine snow-associated microbial communities and their impact on the surrounding water' FEMS Microbiology Ecology. DOI: 10.1093/femsec/fiy198
2017
Pachiadaki, MG, Sintes, E, Bergauer, K, Brown, JM, Record, NR, Swan, BK, Mathyer, ME, Hallam, SJ, Lopez-Garcia, P, Takaki, Y, Nunoura, T, Woyke, T, Herndl, GJ & Stepanauskas, R 2017, 'Major role of nitrite-oxidizing bacteria in dark ocean carbon fixation' Science, vol 358, no. 6366, pp. 1046-1050. DOI: 10.1126/science.aan8260
Clifford, EL, Hansell, DA, Varela, MM, Nieto-Cid, M, Herndl, GJ & Sintes, E 2017, 'Crustacean zooplankton release copious amounts of dissolved organic matter as taurine in the ocean' Limnology and Oceanography, vol 62, no. 6, pp. 2745-2758. DOI: 10.1002/lno.10603
Elling, FJ, Könneke, M, Nicol, GW, Stieglmeier, M, Bayer, B, Spieck, E, de la Torre, JR, Becker, KW, Thomm, M, Prosser, JI, Herndl, GJ, Schleper, C & Hinrichs, K-U 2017, 'Chemotaxonomic characterisation of the thaumarchaeal lipidome' Environmental Microbiology, vol 19, no. 7, pp. 2681-2700. DOI: 10.1111/1462-2920.13759
Glasl, B, Bongaerts, P, Elisabeth, NH, Hoegh-Guldberg, O, Herndl, GJ & Frade, PR 2017, 'Microbiome variation in corals with distinct depth distribution ranges across a shallow-mesophotic gradient (15-85 m)' Coral Reefs, vol 36, no. 2, pp. 447-452. DOI: 10.1007/s00338-016-1517-x
Debeljak, P, Pinto, M, Proietti, M, Reisser, J, Ferrari, FF, Abbas, B, van Loosdrecht, MCM, Slat, B & Herndl, GJ 2017, 'Extracting DNA from ocean microplastics: a method comparison study' Analytical Methods, vol 9, no. 9, pp. 1521-1526. DOI: 10.1039/c6ay03119f
Bochdansky, AB, Clouse, MA & Herndl, GJ 2017, 'Eukaryotic microbes, principally fungi and labyrinthulomycetes, dominate biomass on bathypelagic marine snow' The ISME Journal: multidisciplinary journal of microbial ecology, vol 11, no. 2, pp. 362-373. DOI: 10.1038/ismej.2016.113
Mayol, E, Jiménez, MA, Herndl, GJ, Duarte, CM & Arrieta, JM 2017, 'Corrigendum: Resolving the abundance and air-sea fluxes of airborne microorganisms in the North Atlantic Ocean' Frontiers in Microbiology, vol 8, 1971. DOI: 10.3389/fmicb.2017.01971
Köstner, N, Scharnreitner, L, Jürgens, K, Labrenz, M, Herndl, G & Winter, C 2017, 'High viral abundance as a consequence of low viral decay in the Baltic Sea redoxcline' PLOS ONE, vol 12, no. 6, e0178467. DOI: 10.1371/journal.pone.0178467
Finke, JF, Hunt, BPV, Winter, C, Carmack, E & Suttle, CA 2017, 'Nutrients and other environmental factors influence virus abundance across oxic and hypoxic marine environments.' Viruses, vol 9, no. 152. DOI: 10.3390/v9060152
Landry, Z, Swan, BK, Herndl, GJ, Stepanauskas, R & Giovannoni, SJ 2017, 'SAR202 Genomes from the Dark Ocean Predict Pathways for the Oxidation of Recalcitrant Dissolved Organic Matter' mBio, vol 8, no. 2, ARTN e00413-17. DOI: 10.1128/mBio.00413-17